BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A02LP1|AL427407
(925 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig821 1607 0.0
>3x_Contig821
Length = 3127
Score = 1607 bits (791), Expect = 0.0
Identities = 877/923 (95%), Gaps = 2/923 (0%)
Strand = Plus / Minus
Query: 4 ggatctctttctgaggagtctaccgaattcaaagaattatgtaactgtttgcctgaggat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2946 ggatctctttctgaggagtctaccgaattcaaagaattatgtaactgtttgcctgaggat 2887
Query: 64 gtcgaaaagggwaaagaaaaccttttgaaatgtgtaagaggtccattctttcagcaagca 123
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2886 gtcgaaaagggaaaagaaaaccttttgaaatgtgtaagaggtccattctttcagcaagca 2827
Query: 124 gttgac-attttggacttagctacgaagcagagctattcgggacaacaactctcacaaat 182
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2826 gttgaccattttggacttagctacgaagcagagctattcgggacaacaactctcacaaat 2767
Query: 183 gtttggatattcgtataccggagaaggaccacgagctctatctggaaggacttagaaata 242
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2766 gtttggatattcgtataccggagaaggaccacgagctcta-ctggaaggacttagaaata 2708
Query: 243 agggcctccaggaaaagctaaagaagcmagattcacaatcagaataagaaaatggaaaca 302
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2707 agggcctccaggaaaagctaaagaagcaagattcacaatcagaataagaaaatggaaaca 2648
Query: 303 aaattaatactgaccgttggcagcagcyggtaaataagtytctacataagatttttaatg 362
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 2647 aaattaatactgaccgttggcagcagctggtaaataagtatctacataagatttttaatg 2588
Query: 363 gaccacttatatatgagattbwwtwttkgtttttttktkgkkkakgdtggttgtkaagcc 422
|||||||||||||||||| | | | || | | | | | | | ||||||| |||||
Sbjct: 2587 gaccacttatatatgagaataaatataggtatatatgtgggagaagatggttgttaagcc 2528
Query: 423 tgactagtcccatcygacagcccagtgtaactyatctccagcyttgaatggagccactct 482
|||||||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 2527 tgactagtcccatctgacagcccagtgtaactcatctccagctttgaatggagcaactct 2468
Query: 483 gaggccttttccatcagtgattatytcygggatatyagttgtctttttgaagactgtcac 542
|||||||||||||||||||||||| || ||||||| ||||||||||||||||||||| ||
Sbjct: 2467 gaggccttttccatcagtgattatttctgggatattagttgtctttttgaagactgtaac 2408
Query: 543 gttttggttggacttgatgtcytcyggyttcaatgcataamaygayaatsgtgcatcgcy 602
||||||||||||||||||||| || || |||||||||||| | || ||| |||||||||
Sbjct: 2407 gttttggttggacttgatgtcttctggtttcaatgcataaaatgataatggtgcatcgct 2348
Query: 603 tacgaagttctttaaagtgtccagttttccttgagtctcgaatatctcagccaggcatgg 662
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||
Sbjct: 2347 tacgaagttctttaaagtgtccagttttccttgagtttcgaatatttcagccaggtatgg 2288
Query: 663 mattgccagcgattgcgaaaacacaccggcacatacgcctacatgtttagctttattttc 722
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2287 aattgccagcgattgcgaaaacacaccggcacatacgcctacatgtttagctttattttc 2228
Query: 723 tatcggatgtkgcgcagaatcagatccaaagaaaaagtatggtttcccggatgttgcagc 782
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2227 tatcggatgtggcgcagaatcagatccaaagaaaaagtatggtttcccggatgttgcagc 2168
Query: 783 ttgaactagagcccttttatcgctaggaagctttgcaacaggcttacagaaattgattgg 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2167 ttgaactagagcccttttatcgctaggaagctttgcaacaggcttacagaaattgattgg 2108
Query: 843 atttccagcccaatcgtcaatagtcaagaaaagatgatgcgcggtgatagtwgcggcgac 902
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2107 atttccagcccaatcgtcaatagtcaagaaaagatgatgcgcggtgatagtagcggcgac 2048
Query: 903 catgacatccaatggatccttga 925
|||||||||||||||||||||||
Sbjct: 2047 catgacatccaatggatccttga 2025
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5099
Number of Sequences: 1807
Number of extensions: 5099
Number of successful extensions: 125
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)